Ammonia: The Invisible Killer
Master the nitrogen cycle: Learn why ammonia is the #1 killer in new aquariums, how to distinguish toxic NH3 from ammonium, and how to handle emergency spikes.

Ammonia ($NH_3$ / $NH_4^+$)
Ammonia is the number one killer of fish in new aquariums. It is a colorless, odorless toxic compound that is produced naturally in your tank.
Sources of Ammonia
Where does it come from?
- Fish Waste: Fish excrete ammonia from their gills and in their poop.
- Uneaten Food: Excess food rots and releases ammonia.
- Decaying Plants: Melting leaves or dead biological matter decompose into ammonia.
- Dead Livestock: A dead snail or fish hidden in the back can cause a massive spike.
Toxicity Symptoms
You cannot see ammonia, but you can see its effects on fish:
- Gasping: Fish hanging at the surface, gasping for air.
- Red Gills: The gills look burned or inflamed (lilac/purple color).
- Lethargy: Fish sitting on the bottom, clamped fins.
- Streaks: Red blood streaks in fins or body.
The Chemistry: $NH_3$ vs $NH_4^+$
Total Ammonia Nitrogen (TAN) exists in two forms in your water, depending on pH and Temperature:
- $NH_3$ (Free Ammonia): The TOXIC form. More prevalent at High pH and High Temp.
- $NH_4^+$ (Ammonium): The NON-TOXIC form. More prevalent at Low pH and Low Temp.
The Danger Zone: If you have a pH of 8.0 (Alkaline), even a small amount of ammonia is highly toxic because it exists mostly as $NH_3$. If you have a pH of 6.0 (Acidic), you can tolerate slightly higher generic reading because most of it is harmless Ammonium ($NH_4^+$).
However, do not rely on this safety net. Your goal is always 0 ppm.
Emergency Treatments
If you detect Ammonia (> 0.25 ppm):
- Water Change: Immediately do a 50% water change to dilute the toxin.
- Detoxifiers: Use products like Seachem Prime. They bind ammonia into a non-toxic form for 24-48 hours, keeping fish safe while bacteria catch up.
- Stop Feeding: Do not add more fuel to the fire. Fish can survive weeks without food; they cannot survive days with ammonia.